I have a list of strings (words like), and, while I am parsing a text, I need to check if a word belongs to the group of words of my current list.
However, my input is pretty big (about 600 millions lines), and checking if an element belongs to a list is a O(n) operation according to the Python documentation.
My code is something like:
words_in_line = []
for word in line:
if word in my_list:
words_in_line.append(word)
As it takes too much time (days actually), I wanted to improve that part which is taking most of the time. I have a look at Python collections, and, more precisely, at deque. However, the only give a O(1) operation time access to the head and the tail of a list, not in the middle.
Do someone has an idea about how to do that in a better way?
Best Answer
You might consider a trie or a DAWG or a database. There are several Python implementations of the same.
Here is some relative timings for you to consider of a set vs a list:
Prints:
ie, matching a set of 10000 words against a set of 250,000 words is 17,085 X faster than matching a list of same 10000 words in a list of the same 250,000 words. Using a list for the source and a set for membership testing is 28,392 X faster than an unsorted list alone.
For membership testing, a list is O(n) and sets and dicts are O(1) for lookups.
Conclusion: Use better data structures for 600 million lines of text!